//
// Adapted for biblio: Ron Jerome
// global $openURLResolver; // these variables are defined in 'ini.inc.php'
// global $hostInstitutionAbbrevName;
$co = biblio_contextObject($node);
$query["ctx_ver"]= "Z39.88-2004";
foreach ($co as $coKey => $coValue) {
$coKey = ereg_replace("rft.", "", $coKey);
$coKey = ereg_replace("au[0-9]*", "au", $coKey);
$query[$coKey] = rawurlencode($coValue);
}
$sid = "biblio:". variable_get('site_name', 'Drupal');
$user_sid = !empty($user->biblio_openurl_sid)?$user->biblio_openurl_sid:'';
$query["sid"] = !empty($user_sid) ? check_plain($user_sid) : check_plain(variable_get('biblio_openurl_sid', $sid));
return $query;
}
/**
* DEPRECIATED! this was the original output format which is not to flexable it will be removed
* TODO: remove this function
* @param $node
* @param $base
* @param $style
* @return unknown_type
*/
function theme_biblio_long($node, $base = 'biblio', $style = 'classic') {
if (module_exists('popups')){
popups_add_popups();
}
if (empty ($node->biblio_coins))
biblio_coins_generate($node);
$output .= filter_xss($node->biblio_coins, array('span'));
$layout = variable_get('biblio_node_layout', 'orig');
if (variable_get('biblio_node_layout', 'orig') == 'ft' && strlen(trim($node->body)) && user_access('view full text')) {
$output .= ''. theme('biblio_style', $node, $base, $style) .'
';
$annotation_field = variable_get('biblio_annotations', 'none');
if ($annotation_field != 'none' && $node-> $annotation_field) {
$output .= '';
$output .= check_markup($node->$annotation_field, $node->format, FALSE);
$output .= '
';
}
$output .= check_markup($node->body, $node->format, FALSE);
if (biblio_access('export', $node)) {
$output .= theme('biblio_export_links', $node);
}
return $output;
}
$author_links = variable_get('biblio_author_links', 1);
foreach ((array)$node->biblio_contributors[1] as $auth) {
$authors[] = $author_links ? theme('biblio_author_link', $auth) : check_plain(trim($auth['name']));
}
$authors = implode('; ', (array)$authors);
$output .= theme('biblio_openurl', $node);
$output .= ''. t("Publication Type") .":
". _biblio_localize_type($node->biblio_type, $node->biblio_type_name) ."\n";
$output .= ''. t("Authors") .':
'. $authors ."\n";
$output .= ''. t("Source") .':
';
$source = null;
if ($node->biblio_secondary_title)
$source .= check_plain($node->biblio_secondary_title);
if ($node->biblio_publisher) {
$source .= $source ? ", " : "";
$source .= check_plain($node->biblio_publisher);
}
if ($node->biblio_volume) {
$source .= $source ? ", " : "";
$source .= t('Volume') .' '. check_plain($node->biblio_volume);
}
if ($node->biblio_issue) {
$source .= $source ? ", " : "";
$source .= t('Issue') . ' '.check_plain($node->biblio_issue);
}
if ($node->biblio_number) {
$source .= $source ? ", " : "";
$source .= t('Number') . ' '.check_plain($node->biblio_number);
}
if ($node->biblio_place_published) {
$source .= $source ? ", " : "";
$source .= check_plain($node->biblio_place_published);
}
if ($node->biblio_pages) {
$source .= $source ? ", " : "";
$source .= 'p.'. check_plain($node->biblio_pages);
}
if (isset ($node->biblio_year)) {
$node->biblio_year = _biblio_text_year($node->biblio_year);
$source .= ' ('. check_plain($node->biblio_year) .')';
}
$output .= "$source\n";
if ($node->biblio_isbn)
$output .= ''. t("ISBN") .':
'. check_plain($node->biblio_isbn) ."\n";
if ($node->biblio_call_number)
$output .= ''. t("Call Number") .':
'. check_plain($node->biblio_call_number) ."\n";
if ($node->biblio_accession_number)
$output .= ''. t("Accession Number") .':
'. check_plain($node->biblio_accession_number) ."\n";
if ($node->biblio_other_number)
$output .= ''. t("Other Number") .':
'. check_plain($node->biblio_other_number) ."\n";
if ($node->biblio_url) {
$attrib = (variable_get('biblio_links_target_new_window', null)) ? array(
'target' => '_blank'
) : array();
$output .= ''. t("URL") .':
'. l($node->biblio_url, $node->biblio_url, $attrib) ."\n";
}
if (!empty($node->biblio_keywords)) {
$output .= ''. t("Keywords") .':
'. _biblio_keyword_links( $node->biblio_keywords, $base) ."\n";
}
if ($node->biblio_abst_e)
$output .= ''. t("Abstract") .':
'. check_markup($node->biblio_abst_e, $node->format, FALSE) ."\n";
if ($node->biblio_abst_f)
$output .= ''. check_markup($node->biblio_abst_f, $node->format, FALSE) ."\n";
if ($node->biblio_notes)
$output .= '
'. t("Notes") .':
'. check_markup($node->biblio_notes, $node->format, FALSE) ."\n";
if ( strlen(trim($node->body)) && user_access('view full text') ) {
$output .= ''.t('Full Text').':
'.check_markup($node->body, $node->format, FALSE);
}
return $output;
}
/**
* @param $node
* @param $base
* @param $teaser
* @return unknown_type
*/
function theme_biblio_tabular($node, $base = 'biblio', $teaser = false) {
if (module_exists('popups')){
popups_add_popups();
}
$tid = $node->biblio_type;
$style_name = biblio_get_style();
$style_function = "biblio_style_$style_name"."_author_options";
module_load_include('inc','biblio',"biblio_style_$style_name");
$fields = _biblio_get_field_information($node->biblio_type, TRUE);
_biblio_localize_fields($fields);
$rows[] = array(
array('data' => t('Title'), 'class' => 'biblio-row-title biblio-field-title-title'),
array('data' => filter_xss($node->title, biblio_get_allowed_tags()), 'class' => 'biblio-field-contents-title')
);
$rows[] = array(
array('data' => t('Publication Type'), 'class' => 'biblio-row-title biblio-field-title-type'),
array('data' => isset($node->biblio_type_name) ? _biblio_localize_type($node->biblio_type, $node->biblio_type_name) : $node->biblio_type,
'class' => 'biblio-field-contents-type')
);
if ($node->biblio_url) {
$attrib = (variable_get('biblio_links_target_new_window', null)) ? array('target' => '_blank') : array();
$node->biblio_url = l($node->biblio_url, $node->biblio_url, $attrib);
}
if ($node->biblio_doi) {
$doi_url = '';
$attrib = (variable_get('biblio_links_target_new_window', null)) ? array('target' => '_blank') : array();
if ( ($doi_start = strpos($node->biblio_doi, '10.')) !== FALSE) {
$doi = substr($node->biblio_doi, $doi_start);
$doi_url .= 'http://dx.doi.org/'. $doi;
}
$node->biblio_doi = l($node->biblio_doi, $doi_url, $attrib);
}
foreach ($fields as $key => $row) {
// handling the contributor categories like any other field orders them correctly by weight
if ($row['type'] == 'contrib_widget' && !empty($node->biblio_contributors[$row['fid']][0]['name']) ) {
$author_options = $style_function();
$author_options['numberOfAuthorsTriggeringEtAl'] = 100; //set really high so we see all authors
$data = theme('biblio_format_authors', $node->biblio_contributors[$row['fid']], $author_options, $inline);
}
else if (empty ($node->$row['name']) || $row['name'] == 'biblio_coins') continue;
else {
switch ($row['name']) {
case 'biblio_keywords' :
$data = _biblio_keyword_links($node->$row['name'], $base);
break;
case 'biblio_url' :
case 'biblio_doi' :
// check_plain is not need on these since they have gone through
// the l() function which does a check_plain
$data = $node-> $row['name'];
break;
default :
if ($row['type'] == 'textarea') {
$data = check_markup($node-> $row['name'], $node->format, FALSE);
}
else {
$data = check_plain($node-> $row['name']);
}
}
}
$rows[] = array(
array(
'data' => t($row['title']),
'class' => 'biblio-row-title biblio-field-title-'.str_replace('_', '-', str_replace('biblio_', '', $row['name']))
),
array(
'data' => $data,
'class' => 'biblio-field-contents-'.str_replace('_', '-', str_replace('biblio_', '', $row['name']))
)
);
}
if (strlen(trim($node->body)) && user_access('view full text')) {
$rows[] = array(
array('data' => t('Full Text'), 'valign' => 'top'),
array('data' => check_markup($node->body, $node->format, FALSE))
);
}
$output = '';
$output .= filter_xss($node->biblio_coins, array('span'));
$header = array();
$output .= theme('table', $header, $rows);
$output .= '
';
return $output;
}
function theme_biblio_authors($contributors, $style = 'classic', $cat = 1, $inline = false, $glue = ', ') {
if (empty($contributors)) return; // t('No author information available');
$author_style_function = '_'.$style.'_format_author';
$author_links = variable_get('biblio_author_links', 1);
$base = variable_get('biblio_base', 'biblio');
foreach ($contributors as $key => $author) {
if (!empty($author['name']) && !isset($author['lastname'])) {
$author = biblio_parse_author($author, $cat); // this is needed for form preview to fill in all fields
}
if (strlen($author['name'])) {
$$author['name'] = $author_style_function($author);
if ($author_links) $format = theme('biblio_author_link', $author);
// add the auth_type as css id to allow later formatting
$author_array[] = ''.$format.'';
}
}
if (empty($author_array)) return '';
$output = '';
$output .= implode($glue, $author_array);
$output .= '';
return $output;
}
function _biblio_get_latin1_regex() {
$alnum = "[:alnum:]ÄÅÁÀÂÃÇÉÈÊËÑÖØÓÒÔÕÜÚÙÛÍÌÎÏÆäåáàâãçéèêëñöøóòôõüúùûíìîïæÿß";
// Matches ISO-8859-1 letters:
$alpha = "[:alpha:]ÄÅÁÀÂÃÇÉÈÊËÑÖØÓÒÔÕÜÚÙÛÍÌÎÏÆäåáàâãçéèêëñöøóòôõüúùûíìîïæÿß";
// Matches ISO-8859-1 control characters:
$cntrl = "[:cntrl:]";
// Matches ISO-8859-1 dashes & hyphens:
$dash = "-–";
// Matches ISO-8859-1 digits:
$digit = "[\d]";
// Matches ISO-8859-1 printing characters (excluding space):
$graph = "[:graph:]ÄÅÁÀÂÃÇÉÈÊËÑÖØÓÒÔÕÜÚÙÛÍÌÎÏÆäåáàâãçéèêëñöøóòôõüúùûíìîïæÿß";
// Matches ISO-8859-1 lower case letters:
$lower = "[:lower:]äåáàâãçéèêëñöøóòôõüúùûíìîïæÿß";
// Matches ISO-8859-1 printing characters (including space):
$print = "[:print:]ÄÅÁÀÂÃÇÉÈÊËÑÖØÓÒÔÕÜÚÙÛÍÌÎÏÆäåáàâãçéèêëñöøóòôõüúùûíìîïæÿß";
// Matches ISO-8859-1 punctuation:
$punct = "[:punct:]";
// Matches ISO-8859-1 whitespace (separating characters with no visual representation):
$space = "[\s]";
// Matches ISO-8859-1 upper case letters:
$upper = "[:upper:]ÄÅÁÀÂÃÇÉÈÊËÑÖØÓÒÔÕÜÚÙÛÍÌÎÏÆ";
// Matches ISO-8859-1 "word" characters:
$word = "_[:alnum:]ÄÅÁÀÂÃÇÉÈÊËÑÖØÓÒÔÕÜÚÙÛÍÌÎÏÆäåáàâãçéèêëñöøóòôõüúùûíìîïæÿß";
// Defines the PCRE pattern modifier(s) to be used in conjunction with the above variables:
// More info:
$patternModifiers = "";
return array($alnum, $alpha, $cntrl, $dash, $digit, $graph, $lower,
$print, $punct, $space, $upper, $word, $patternModifiers);
}
/*
* Helper function for theme_biblio_format_authors() and theme_biblio_page_number()
*/
function _biblio_get_utf8_regex() {
// Matches Unicode letters & digits:
$alnum = "\p{Ll}\p{Lu}\p{Lt}\p{Lo}\p{Nd}"; // Unicode-aware equivalent of "[:alnum:]"
// Matches Unicode letters:
$alpha = "\p{Ll}\p{Lu}\p{Lt}\p{Lo}"; // Unicode-aware equivalent of "[:alpha:]"
// Matches Unicode control codes & characters not in other categories:
$cntrl = "\p{C}"; // Unicode-aware equivalent of "[:cntrl:]"
// Matches Unicode dashes & hyphens:
$dash = "\p{Pd}";
// Matches Unicode digits:
$digit = "\p{Nd}"; // Unicode-aware equivalent of "[:digit:]"
// Matches Unicode printing characters (excluding space):
$graph = "^\p{C}\t\n\f\r\p{Z}"; // Unicode-aware equivalent of "[:graph:]"
// Matches Unicode lower case letters:
$lower = "\p{Ll}\p{M}"; // Unicode-aware equivalent of "[:lower:]"
// Matches Unicode printing characters (including space):
$print = "\P{C}"; // same as "^\p{C}", Unicode-aware equivalent of "[:print:]"
// Matches Unicode punctuation (printing characters excluding letters & digits):
$punct = "\p{P}"; // Unicode-aware equivalent of "[:punct:]"
// Matches Unicode whitespace (separating characters with no visual representation):
$space = "\t\n\f\r\p{Z}"; // Unicode-aware equivalent of "[:space:]"
// Matches Unicode upper case letters:
$upper = "\p{Lu}\p{Lt}"; // Unicode-aware equivalent of "[:upper:]"
// Matches Unicode "word" characters:
$word = "_\p{Ll}\p{Lu}\p{Lt}\p{Lo}\p{Nd}"; // Unicode-aware equivalent of "[:word:]" (or "[:alnum:]" plus "_")
// Defines the PCRE pattern modifier(s) to be used in conjunction with the above variables:
// More info:
$patternModifiers = "u"; // the "u" (PCRE_UTF8) pattern modifier causes PHP/PCRE to treat pattern strings as UTF-8
return array($alnum, $alpha, $cntrl, $dash, $digit, $graph, $lower,
$print, $punct, $space, $upper, $word, $patternModifiers);
}
function _biblio_get_regex_patterns() {
// Checks if PCRE is compiled with UTF-8 and Unicode support
if (!@preg_match('/\pL/u', 'a')) {
// probably a broken PCRE library
return _biblio_get_latin1_regex();
} else {
// Unicode safe filter for the value
return _biblio_get_utf8_regex();
}
}
function theme_biblio_format_authors($contributors, $options, $inline = false)
{
if (empty($contributors)) return;
list($alnum, $alpha, $cntrl, $dash, $digit, $graph, $lower,
$print, $punct, $space, $upper, $word, $patternModifiers) = _biblio_get_regex_patterns();
$base = variable_get('biblio_base', 'biblio');
$author_links = variable_get('biblio_author_links', 1);
$authorCount = count($contributors); // check how many authors we have to deal with
$output = ""; // this variable will hold the final author string
$includeStringAfterFirstAuthor = false;
if (empty($options['numberOfAuthorsTriggeringEtAl'])) $options['numberOfAuthorsTriggeringEtAl'] = $authorCount;
if (empty($options['includeNumberOfAuthors'])) $options['includeNumberOfAuthors'] = $authorCount;
foreach($contributors as $rank => $author)
{
if (empty($author['name'])) continue;
if (!isset($author['lastname'])) {
module_load_include('inc','biblio',"biblio.contributors");
$author = biblio_parse_author($author, $author['auth_type']); // this is needed for form preview to fill in all fields
}
if (!empty($author['firstname'])) {
if ($options['shortenGivenNames']) // if we're supposed to abbreviate given names
{
// within initials, reduce all full first names (-> defined by a starting uppercase character, followed by one ore more lowercase characters)
// to initials, i.e., only retain their first character
$author['firstname'] = preg_replace("/([$upper])[$lower]+/$patternModifiers", '\\1', $author['firstname']);
$author['initials'] = $author['firstname'] . $author['initials'];
unset($author['firstname']);
//$author['firstname'] = drupal_substr($author['firstname'], 0, 1);
// the next line caused extra betweenInitialsDelim to appear in some circumstances
//$author['firstname'] = preg_replace("/($space|$dash)?/$patternModifier", $options['betweenInitialsDelim'], $author['firstname']);
}
}
if (isset($author['initials'])) {
// within initials, remove any dots:
$author['initials'] = preg_replace("/([$upper])\.+/$patternModifiers", "\\1", $author['initials']);
//$author['initials'] = str_replace('.', '', $author['initials']);
// within initials, remove any spaces *between* initials:
$author['initials'] = preg_replace("/(?<=[-$upper]) +(?=[-$upper])/$patternModifiers", "", $author['initials']);
//$author['initials'] = str_replace(' ', '', $author['initials']);
// within initials, add a space after a hyphen, but only if ...
if (preg_match('/ $/', $options['betweenInitialsDelim'])) { // ... the delimiter that separates initials ends with a space
$author['initials'] = preg_replace("/-(?=[$upper])/$patternModifiers", "- ", $author['initials']);
}
// then, separate initials with the specified delimiter:
$delim = $options['betweenInitialsDelim'];
$author['initials'] = preg_replace("/([$upper])(?=[^$lower]+|$)/$patternModifiers", "\\1$delim", $author['initials']);
$shortenInitials = (isset($options['numberOfInitialsToKeep'])) ? $options['numberOfInitialsToKeep'] : FALSE;
if ($shortenInitials) $author['initials'] = drupal_substr($author['initials'], 0, $shortenInitials);
// if ($options['shortenGivenNames'] && !empty($author['firstname'])) {
// $author['firstname'] = $author['firstname'].$options['betweenInitialsDelim'].$author['initials'];
// if ($shortenInitials) $author['firstname'] = drupal_substr($author['firstname'], 0, $shortenInitials);
// }
if(!empty($author['firstname'])) {
$author['firstname'] = $author['firstname'].' '.$author['initials'];
}
elseif(empty($author['firstname'])) {
$author['firstname'] = $author['initials'];
}
}
// if there is a surname prefix like "van", "von" etc, stick it back before the last name.
if (!empty($author['prefix'])) $author['lastname'] = $author['prefix'] .' '. $author['lastname'];
if (!empty($author['suffix'])) $author['lastname'] = $author['lastname'] .', '. $author['suffix'];
if (!empty($author['firstname'])) {
if ($rank == 0) { // -> first author
if($options['initialsBeforeAuthorFirstAuthor']) {
$singleAuthorString = $author['firstname'].$options['AuthorsInitialsDelimFirstAuthor'].$author['lastname'];
}
else{
$singleAuthorString = $author['lastname'].$options['AuthorsInitialsDelimFirstAuthor'].$author['firstname'];
}
}
else { // $rank > 0 // -> all authors except the first one
if($options['initialsBeforeAuthorStandard']) {
$singleAuthorString = $author['firstname'].$options['AuthorsInitialsDelimStandard'].$author['lastname'];
}
else{
$singleAuthorString = $author['lastname'].$options['AuthorsInitialsDelimStandard'].$author['firstname'];
}
}
}
else {
$singleAuthorString = $author['lastname'];
}
if ($author_links) {
$author['name'] = $singleAuthorString;
$singleAuthorString = theme('biblio_author_link', $author);
}
else {
$singleAuthorString = check_plain($singleAuthorString);
}
// append this author to the final author string:
if (($rank == 0) OR ($rank + 1) < $authorCount) // -> first author, or (for multiple authors) all authors except the last one
{
if ($rank == 0) // -> first author
$output .= $singleAuthorString;
else // -> for multiple authors, all authors except the first or the last one
$output .= $options['BetweenAuthorsDelimStandard'] . $singleAuthorString;
// we'll append the string in '$customStringAfterFirstAuthors' to the number of authors given in '$includeNumberOfAuthors' if the total number of authors is greater than the number given in '$numberOfAuthorsTriggeringEtAl':
if ((($rank + 1) == $options['includeNumberOfAuthors']) AND ($authorCount > $options['numberOfAuthorsTriggeringEtAl']))
{
if (ereg("__NUMBER_OF_AUTHORS__", $options['customStringAfterFirstAuthors']))
$customStringAfterFirstAuthors = preg_replace("/__NUMBER_OF_AUTHORS__/", ($authorCount - $options['includeNumberOfAuthors']), $options['customStringAfterFirstAuthors']); // resolve placeholder
$includeStringAfterFirstAuthor = true;
break;
}
}
elseif (($authorCount > 1) AND (($rank + 1) == $authorCount)) // -> last author (if multiple authors)
{
$output .= $options['BetweenAuthorsDelimLastAuthor'] . $singleAuthorString;
}
}
// do some final clean up:
if ($options['encodeHTML'])
//$output = encodeHTML($output); // HTML encode higher ASCII characters within the newly arranged author contents
if ($includeStringAfterFirstAuthor)
$output .= $options['customStringAfterFirstAuthors']; // the custom string won't get HTML encoded so that it's possible to include HTML tags (such as '') within the string
$output = preg_replace("/ +/", " ", $output); // remove double spaces (which occur e.g., when both, $betweenInitialsDelim & $newAuthorsInitialsDelim..., end with a space)
$output = preg_replace("/ +([,.;:?!()]|$)/", "\\1", $output); // remove excess spaces before [,.;:?!()] and from the end of the author string
return $output;
}
function theme_biblio_author_link($author) {
$base = variable_get('biblio_base', 'biblio');
$link_to_profile = variable_get('biblio_author_link_profile', 0);
$options = array();
$inline = $inline ? "/inline" : "";
if (isset($_GET['sort'])) {
$options['query']['sort'] = $_GET['sort'];
}
if (isset($_GET['order'])) {
$options['query']['order'] = $_GET['order'];
}
if (isset($author['drupal_uid']) && $author['drupal_uid'] > 0) {
$options['attributes']['class'] = 'biblio-local-author';
}
if ($link_to_profile && $author['drupal_uid'] ) {
return l(trim($author['name']), "user/".$author['drupal_uid']."/$base" );
}
else {
return l(trim($author['name']), "$base/author/". $author['cid'] .$inline, $options );
}
return $html;
}
// Format page information:
//
// NOTES: - this function (and refbase in general) assumes following rules for the original formatting of page information in '$origPageInfo':
// - single-page items are given as a page range with identical start & end numbers (e.g. "127-127")
// - multi-page items are given as a page range where the end number is greater than the start number (e.g. "127-132")
// - for multi-page items where only the start page is known, a hyphen is appended to the start page (e.g. "127-")
// - total number of pages are given with a "pp" suffix (e.g. "498 pp"), see TODO
// - the given page info is left as is if it does not match any of the above rules (e.g. a single page number is ambiguous since it
// could mean a single page or the total number of pages)
// - the function attempts to deal with page locators that contain letters (e.g. "A1 - A3" or "4a-4c") but, ATM, locator parts (e.g. "A1")
// must contain at least one digit character & must not contain any whitespace
//
// TODO: - should we only use Unicode-aware regex expressions (i.e. always use '$space', '$digit' or '$word' instead of ' ', '\d' or '\w', etc)?
// - recognize & process total number of pages
// - for '$shortenPageRangeEnd=true', add support for page locators that contain letters (e.g. "A1 - A3" or "4a-4c")
function theme_biblio_page_number($origPageInfo, $pageRangeDelim = "-", $singlePagePrefix = "", $pageRangePrefix = "", $totalPagesPrefix = "", $singlePageSuffix = "", $pageRangeSuffix = "", $totalPagesSuffix = "", $shortenPageRangeEnd = false)
{
list($alnum, $alpha, $cntrl, $dash, $digit, $graph, $lower,
$print, $punct, $space, $upper, $word, $patternModifiers) = _biblio_get_regex_patterns();
// Check original page info for any recognized page locators, and process them appropriately:
if (preg_match("/\w*\d+\w* *[$dash]+ *(?:\w*\d+\w*)?/$patternModifiers", $origPageInfo)) // the original page info contains a page range (like: "127-127", "127-132", "A1 - A3", "4a-4c", or "127-" if only start page given)
{
// Remove any whitespace around dashes or hyphens that indicate a page range:
$origPageInfo = preg_replace("/(\w*\d+\w*) *([$dash]+) *(\w*\d+\w*)?(?=[^\w\d]|$)/$patternModifiers", "\\1\\2\\3", $origPageInfo);
// Split original page info into its functional parts:
// NOTE: ATM, we simply split on any whitespace characters, then process all parts with page ranges
// (this will also reduce runs of whitespace to a single space)
$partsArray = preg_split("/ +/", $origPageInfo);
$partsCount = count($partsArray);
for ($i=0; $i < $partsCount; $i++)
{
// Format parts with page ranges:
// - single-page item:
if (preg_match("/(\w*\d+\w*)[$dash]+\\1(?=[^\w\d]|$)/$patternModifiers", $partsArray[$i])) // this part contains a page range with identical start & end numbers (like: "127-127")
$partsArray[$i] = preg_replace("/(\w*\d+\w*)[$dash]+\\1(?=[^\w\d]|$)/$patternModifiers", $singlePagePrefix . "\\1" . $singlePageSuffix, $partsArray[$i]);
// - multi-page item:
elseif (preg_match("/\w*\d+\w*[$dash]+(?:\w*\d+\w*)?(?=[^\w\d]|$)/$patternModifiers", $partsArray[$i])) // this part contains a page range (like: "127-132", or "127-" if only start page given)
{
// In case of '$shortenPageRangeEnd=true', we abbreviate ending page numbers so that digits aren't repeated unnecessarily:
if ($shortenPageRangeEnd AND preg_match("/\d+[$dash]+\d+/$patternModifiers", $partsArray[$i])) // ATM, only digit-only page locators (like: "127-132") are supported
{
// NOTE: the logic of this 'if' clause doesn't work if the original page info contains something like "173-190; 195-195" (where, for the first page range, '$endPage' would be "190;" and not "190")
list($startPage, $endPage) = preg_split("/[$dash]+/$patternModifiers", $partsArray[$i]);
$countStartPage = strlen($startPage);
$countEndPage = strlen($endPage);
if(($countStartPage == $countEndPage) AND ($startPage < $endPage))
{
for ($j=0; $j < $countStartPage; $j++)
{
if (preg_match("/^" . substr($startPage, $j, 1) . "/", $endPage)) // if the ending page number has a digit that's identical to the starting page number (at the same digit offset)
$endPage = substr($endPage, 1); // remove the first digit from the remaining ending page number
else
break;
}
}
$partsArray[$i] = $pageRangePrefix . $startPage . $pageRangeDelim . $endPage . $pageRangeSuffix;
}
else // don't abbreviate ending page numbers:
$partsArray[$i] = preg_replace("/(\w*\d+\w*)[$dash]+(\w*\d+\w*)?(?=[^\w\d]|$)/$patternModifiers", $pageRangePrefix . "\\1" . $pageRangeDelim . "\\2" . $pageRangeSuffix, $partsArray[$i]);
}
}
$newPageInfo = join(" ", $partsArray); // merge again all parts
}
else
$newPageInfo = $origPageInfo; // page info is ambiguous, so we don't mess with it
return $newPageInfo;
}
/**
* Applies a "style" function to a single node.
*
* @param $node A node
* @param $base The base url for biblio (defaults to /biblio)
* @param $style_name The name of the style to apply
* @param $inline "inline" mode returns the raw HTML rather than letting drupal render the whole page.
* @return A string containing the styled (HTML) node
*/
function theme_biblio_style($node, $base = 'biblio', $style_name = 'classic', $inline = false) {
module_load_include('inc','biblio',"biblio_style_$style_name");
$style_function = "biblio_style_$style_name";
$styled_node = $style_function ($node, $base, $inline);
if (empty ($node->biblio_coins))
biblio_coins_generate($node);
return ($styled_node . filter_xss($node->biblio_coins, array('span')));
}
/**
* @param $node
* @param $base
* @param $style
* @param $inline
* @return unknown_type
*/
function theme_biblio_entry($node, $base = 'biblio', $style = 'classic', $inline = false) {
$output = "\n".'' . "\n" ;
$output .= '
' . "\n" ;
if (!$node->status) {
$output .= '
';
}
// first add the styled entry...
$output .= theme('biblio_style', $node, $base, $style, $inline);
// now add the various links
if ($node->biblio_abst_e) {
$output .= '
';
$output .= l(" Abstract", "node/$node->nid") ."\n";
$output .= '';
}
$annotation_field = variable_get('biblio_annotations', 'none');
if ($annotation_field != 'none' && $node-> $annotation_field) {
$output .= '
';
$output .= check_markup($node->$annotation_field, $node->format, FALSE);
$output .= '
';
}
if (biblio_access('export', $node)) {
$output .= theme('biblio_export_links',$node);
}
if (biblio_access('download', $node)) {
// add links to attached files (if any)
$output .= theme('biblio_download_links',$node);
}
if (!$node->status) {
$output .= '
';
}
$output .= "\n
';
foreach (element_children($form['current']) as $key) {
$output .= '- '. drupal_render($form['current'][$key]) .'
';
}
$output .= '
';
}
$output .= ''. (sizeof($form['current']) ? '- '. t('and') .' '. t('where') .'
' : '') .'- ';
foreach (element_children($form['filter']) as $key) {
$output .= drupal_render($form['filter'][$key]);
}
$output .= '
';
$output .= '- '. t('is') .'
- ';
foreach (element_children($form['status']) as $key) {
$output .= drupal_render($form['status'][$key]);
}
$output .= '
';
$output .= '
';
$output .= ''. drupal_render($form['buttons']) .'
';
$output .= '
';
return $output;
}
/**
* @param $form
* @return unknown_type
*/
function theme_biblio_form_filter(& $form) {
$output .= '';
$output .= drupal_render($form['filters']);
$output .= '
';
$output .= drupal_render($form);
return $output;
}
/**
* @param $form
* @return unknown_type
*/
function theme_biblio_admin_types_edit_form($form) {
drupal_add_tabledrag('field-table', 'order', 'sibling', 'weight',NULL,NULL,false);
$tid = (!empty ($form['#parameters'][2])) ? $form['#parameters'][2] : FALSE;
// drupal_set_title($form['type_name'] ? $form['type_name']['#value'] : t('Common'));
// build the table with all the fields if no $tid is given, or only the common
// and customized fields if $tid is given
$conf_table = array();
foreach (element_children($form['configured_flds']) as $fld) {
$form['configured_flds'][$fld]['weight']['#attributes']['class'] = 'weight';
$conf_row = array();
$conf_row[] = array('data' => drupal_render($form['configured_flds'][$fld]['name']));
$conf_row[] = array('data' => drupal_render($form['configured_flds'][$fld]['title']));
if (isset($form['configured_flds'][$fld]['auth_type'])) {
$form['configured_flds'][$fld]['hint']['#size'] = 15;
$conf_row[] = array('data' => drupal_render($form['configured_flds'][$fld]['hint']));
$conf_row[] = array('data' => drupal_render($form['configured_flds'][$fld]['auth_type']));
} else {
$form['configured_flds'][$fld]['hint']['#size'] = ($tid ? 38: 36);
$conf_row[] = array('data' => drupal_render($form['configured_flds'][$fld]['hint']), 'colspan' => 2);
}
foreach (element_children($form['configured_flds'][$fld]['checkboxes']) as $oid) {
if (is_array($form['configured_flds'][$fld]['checkboxes'])) {
$conf_row[] = array(
'data' => drupal_render($form['configured_flds'][$fld]['checkboxes'][$oid]),
'title' => $oid);
}
}
$conf_row[] = array('data' => drupal_render($form['configured_flds'][$fld]['weight']));
$conf_table[] = array('data' => $conf_row, 'class' => 'draggable');
}
if ($tid) {
$header = array(t('Field Name'), t('Title'), t('Hint'), '', t('Visible'), t('Required'), t('Weight'));
}
else {
$header = array(t('Field Name'), t('Default Title'), t('Hint'), '', t('Common'), t('Required'), t('Autocomplete'), t('Weight'));
}
$output = '';
$output .= '
'. drupal_render($form['top_message']) .'
';
$output .= drupal_render($form['help']);
$output .= drupal_render($form['type_name']);
$output .= drupal_render($form['options']);
$output .= theme('table', $header, $conf_table, array('id' => 'field-table'));
$output .= ''. drupal_render($form['submit']) .'';
$output .= drupal_render($form);
return $output;
}
function theme_biblio_download_links($node = NULL) {
$files = '';
if (!empty ($node->files) && count($node->files) > 0 && user_access('view uploaded files')) {
$files .= '';
$files .= ' '. t('Download') .': ';
$file_count = 0;
foreach ($node->files as $file) {
if ($file->list) {
if (variable_get('biblio_download_links_to_node', 0)) {
$href = 'biblio/view/'.$node->nid;
}
else {
$href = file_create_url($file->filepath);
}
$text = $file->description ? $file->description : $file->filename;
if ($file_count) $files .= '; ';
$files .= l($text, $href) .' ('. format_size($file->filesize).')';
$file_count++;
}
}
$files .= '';
}
if (module_exists('filefield')) { // now lets get any CCK FileField files...
$fields = filefield_get_field_list('biblio');
foreach ($fields as $field_name => $field) {
if (filefield_view_access($field_name, $node)) {
$field_files = filefield_get_node_files($node, $field_name);
if ($field_files) {
foreach ($field_files as $file) {
if ($file['fid']) {
$files .= theme('filefield_file', $file);
}
}
}
}
}
}
return $files;
}
/**
* Creates a group of links for the various export functions
* @param $nid the node id to export (if omitted, all nodes in the current view will be exported
* @return an un-ordered list of class "biblio-export-buttons"
*/
function theme_biblio_export_links($node = NULL) {
global $pager_total_items;
$base = variable_get('biblio_base', 'biblio');
$show_link = variable_get('biblio_export_links', array('rtf' => TRUE, 'tagged' => TRUE, 'xml' => TRUE, 'bibtex' => TRUE));
$show_link['google'] = variable_get('biblio_google_link', 1);
$links = '';
if ($show_link['rtf']) $links .= ' '. _build_biblio_link($base, $node, 'rtf') .'';
if ($show_link['tagged']) $links .= ' '. _build_biblio_link($base, $node, 'tagged') .'';
if ($show_link['xml']) $links .= ' '. _build_biblio_link($base, $node, 'xml') .'';
if ($show_link['bibtex']) $links .= ' '. _build_biblio_link($base, $node, 'bibtex') .'';
if ($show_link['google'] && !empty($node))
$links .= ' '. _build_biblio_link($base, $node, 'google') .'';
if ($show_link['pubmed'] && module_exists('biblio_pm') && !(empty($node))) {
$links .= ' '._build_biblio_link($base, $node, 'pubmed') .'';
}
if ($node) $openurl_link = theme('biblio_openurl', $node);
if (!empty($openurl_link)) {
$links .= ' '. l($openurl_link['title'], $openurl_link['href'], $openurl_link) .'';
}
if (!empty($links)) $links = '';
if (empty($node) && !empty($links)) {
$links = t('Export @count results', array('@count' => $pager_total_items[0])).':' . $links;
}
return $links;
}
/**
* Creates a link to export a node (or view) in EndNote Tagged format
*
* @param $base this is the base url (defaults to /biblio)
* @param $nid the node id, if NULL then the current view is exported
* @return a link (Tagged)
*/
function _build_biblio_link($base, $node = NULL, $type = NULL) {
$nid = ($node) ? $node->nid : NULL;
switch ($type) {
case 'bibtex':
$link = _build_biblio_bibtex_link($base, $nid);
break;
case 'tagged':
$link = _build_biblio_tagged_link($base, $nid);
break;
case 'xml':
$link = _build_biblio_xml_link($base, $nid);
break;
case 'google':
$link = _build_google_scholar_link($node);
break;
case 'rtf':
$link = _build_biblio_rtf_link($base, $nid);
break;
case 'pubmed':
$link = biblio_pm_biblio_lookup_link($node);
$link = $link['biblio_pubmed'];
break;
}
if (!empty($link)) return l($link['title'], $link['href'], $link);
}
function _build_biblio_rtf_link($base, $nid) {
return array(
'title' => t('RTF'),
'href' => "$base/export/rtf/$nid",
'attributes' => array(
'title' => t("Click to download the RTF formatted file")
)
);
}
function _build_biblio_tagged_link($base, $nid) {
if (module_exists('popups') && !empty($nid)) {
return array(
'title' => t('Tagged'),
'href' => "$base/export/tagged/$nid/popup",
'attributes' => array(
'class' => 'popups',
'title' => t("Click to get the EndNote Tagged output ")
)
);
}
else {
return array(
'title' => t('Tagged'),
'href' => "$base/export/tagged/$nid",
'attributes' => array(
'title' => t("Click to download the EndNote Tagged formatted file")
)
);
}
}
/**
* Creates a link to export a node (or view) in BibTEX format
*
* @param $base this is the base url (defaults to /biblio)
* @param $nid the node id, if NULL then the current view is exported
* @return a link (BibTEX)
*/
function _build_biblio_bibtex_link($base, $nid = NULL) {
if (module_exists('popups') && !empty($nid)) {
return array(
'title' => t('BibTex'),
'href' => "$base/export/bibtex/$nid/popup",
'attributes' => array(
'class' => 'popups',
'title' => t("Click to get the BibTEX output ")
)
);
}
else {
return array(
'title' => t('BibTex'),
'href' => "$base/export/bibtex/$nid",
'attributes' => array(
'title' => t("Click to download the BibTEX formatted file")
)
);
}
}
/**
* Creates a link to export a node (or view) in XML format
*
* @param $base this is the base url (defaults to /biblio)
* @param $nid the node id, if NULL then the current view is exported
* @return a link (XML)
*/
function _build_biblio_xml_link($base, $nid = NULL) {
return array(
'title' => t('XML'),
'href' => "$base/export/xml/$nid",
'attributes' => array(
'title' => t("Click to download the XML formatted file")
)
);
}
function _build_google_scholar_link($node) {
$query = array();
$query['btnG'] = 'Search+Scholar';
$query['as_q'] = '"' . str_replace(array(' ', '(', ')'), array('+'), $node->title) . '"'; // as_q = all the words
$query['as_sauthors'] = $node->biblio_contributors[1][0]['lastname'];
$query['as_occt'] = 'any';
$query['as_epq'] = ''; // exact phrase
$query['as_oq'] = ''; // at least one of the words
$query['as_eq'] = ''; // without the words
$query['as_publication'] = ''; // published in
$query['as_ylo'] = ''; // lower date in date range
$query['as_yhi'] = ''; // upper date in date range
$query['as_sdtAAP'] = 1; //Search articles in all subject areas
$query['as_sdtp'] = 1; //include patents
return array(
'title' => t('Google Scholar'),
'href' => 'http://scholar.google.com/scholar',
'attributes' => array('title' => t("Click to search Google Scholar for this entry")),
'query' => $query,
);
}
/**
* @param $form
* @return unknown_type
*/
function theme_biblio_contributors($form) {
$rows = array();
if ($form['#hideRole']) $headers = array('', t('Name'), t('Weight'));
else $headers = array('', t('Name'), t('Role'), t('Weight'));
drupal_add_tabledrag($form['#id'], 'order', 'sibling', 'rank');
foreach (element_children($form) as $key) {
// No need to print the field title every time.
unset ($form[$key]['name']['#title'], $form[$key]['auth_type']['#title']);
// Add class to group weight fields for drag and drop.
$form[$key]['rank']['#attributes']['class'] = 'rank';
// Build the table row.
$row = array('');
$row[] = array('data' => drupal_render($form[$key]['name']),
'class' => 'biblio-contributor');
if (!$form['#hideRole']) {
$row[] = array('data' => drupal_render($form[$key]['auth_type']),
'class' => 'biblio-contributor-type');
}
$row[] = drupal_render($form[$key]['rank']);
$rows[] = array('data' => $row, 'class' => 'draggable');
}
$output = theme('table', $headers, $rows, array('id' => $form['#id']));
$output .= drupal_render($form);
return $output;
}
/**
* This function creates a string of letters (A - Z), which
* depending on the sorting are either linked to author or title
* filters i.e. clicking on the A when in the listing is sorted by
* authors will bring up a list of all the entries where the first
* character of the primary authors last name is "A"
*
* @param $type either "author or title"
* @return a chunk of HTML code as described above
*/
function theme_biblio_alpha_line($type = 'author',$current = NULL, $path = NULL) {
$options = array();
$base = variable_get('biblio_base', 'biblio');
$all = '';
switch ($type){
case 'authors':
case 'keywords':
$path = (ord(substr($_GET['q'],-1)) > 97) ? $_GET['q'] . "/" : substr($_GET['q'], 0, -1);
$all = '['.l(t('Show ALL'), substr($_GET['q'], 0, -2)).']' ;
break;
case 'keyword':
$options['query'] = array('sort' => 'keyword');
$path = "$base/keyword/";
$all_query['query'] = array('sort' => 'keyword', 'order' => $_GET['order']);
$all = '['.l(t('Show ALL'), $base,$all_query).']' ;
break;
case 'author':
$options['query'] = array('sort' => 'author');
$path = "$base/ag/";
$all_query['query'] = array('sort' => 'author', 'order' => $_GET['order']);
$all = '['.l(t('Show ALL'), $base,$all_query).']' ;
break;
case 'title':
$options['query'] = array('sort' => 'title');
$path = "$base/tg/";
$all_query['query'] = array('sort' => 'title', 'order' => $_GET['order']);
$all = '['.l(t('Show ALL'), $base,$all_query).']' ;
break;
default:
if (!isset ($_GET['sort']) || $_GET['sort'] == 'year' || $_GET['sort'] == 'type')
return;
$inline = $inline ? "/inline" : "";
if (isset ($_GET['sort'])) {
$options['query']['sort'] = $_GET['sort'];
if ($_GET['sort'] == 'author')
$path = "$base/ag/";
if ($_GET['sort'] == 'title')
$path = "$base/tg/";
}
}
if (isset ($_GET['order'])) {
$options['query']['order'] = $_GET['order'];
}
$output = '';
for ($i = 65; $i <= 90; $i++) {
if ($i == ord(strtoupper($current))){
$output .= '['.chr($i).'] ';
}
else{
$output .= l(chr($i), $path. chr($i), $options) .' ';
}
}
if($current) $output .= ' '.$all;
$output .= '
';
return $output;
}
/**
* Themes the author editing form
*
* @param $form
* @return rendered form
*/
function theme_biblio_admin_author_edit_form($form){
$rows = array();
$header = array();
$rows[] = array(
array('data' => drupal_render($form['prefix'])),
array('data' => drupal_render($form['firstname'])),
array('data' => drupal_render($form['initials'])),
array('data' => drupal_render($form['lastname'])),
array('data' => drupal_render($form['suffix'])));
$rows[] = array(array('data' => drupal_render($form['name']) . drupal_render($form['no_format']), 'colspan' => 5));
$rows[] = array(array('data' => drupal_render($form['affiliation']), 'colspan' => 5));
$rows[] = array(array('data' => drupal_render($form['drupal_uid']), 'colspan' => 5));
$output = theme('table', $header, $rows);
$output .= drupal_render($form['merge']);
$output .= drupal_render($form['link']);
$output .= drupal_render($form);
return $output;
}
function theme_biblio_admin_orphans_form($form) {
// If there are any orphans, then $form['name'] contains a list of the author names
$has_items = isset($form['name']) && is_array($form['name']);
$select_header = $has_items ? theme('table_select_header_cell') : '';
$header = array($select_header, t('Author Name'), t('Affiliation'));
$output = '';
$output .= drupal_render($form['submit']);
if ($has_items) {
foreach (element_children($form['name']) as $key) {
$row = array();
$row[] = drupal_render($form['authors'][$key]);
$row[] = drupal_render($form['name'][$key]);
$row[] = drupal_render($form['affiliation'][$key]);
$rows[] = $row;
}
}
else {
$rows[] = array(array('data' => t('There are no orphaned authors in the database.'), 'colspan' => '3'));
}
$output .= theme('table', $header, $rows);
if ($form['pager']['#value']) {
$output .= drupal_render($form['pager']);
}
$output .= drupal_render($form);
return $output;
}
function theme_biblio_admin_keyword_orphans_form($form) {
// If there are any orphans, then $form['name'] contains a list of the author names
$has_items = isset($form['keyword']) && is_array($form['keyword']);
$select_header = $has_items ? theme('table_select_header_cell') : '';
$header = array($select_header, t('Keyword'));
$output = '';
$output .= drupal_render($form['submit']);
if ($has_items) {
foreach (element_children($form['keyword']) as $key) {
$row = array();
$row[] = drupal_render($form['keywords'][$key]);
$row[] = drupal_render($form['keyword'][$key]);
$rows[] = $row;
}
}
else {
$rows[] = array(array('data' => t('There are no orphaned keywords in the database.'), 'colspan' => '2'));
}
$output .= theme('table', $header, $rows);
if ($form['pager']['#value']) {
$output .= drupal_render($form['pager']);
}
$output .= drupal_render($form);
return $output;
}